diff --git a/src/Plugins/Concerns/HandleArguments.php b/src/Plugins/Concerns/HandleArguments.php
index 6fdcff8c..e12baec6 100644
--- a/src/Plugins/Concerns/HandleArguments.php
+++ b/src/Plugins/Concerns/HandleArguments.php
@@ -50,11 +50,14 @@ trait HandleArguments
      */
     public function popArgument(string $argument, array $arguments): array
     {
-        $arguments = array_flip($arguments);
+        $key = array_search($argument, $arguments, true);
 
-        unset($arguments[$argument]);
+        while ($key !== false) {
+            unset($arguments[$key]);
+            $key = array_search($argument, $arguments, true);
+        }
 
-        return array_values(array_flip($arguments));
+        return array_values($arguments);
     }
 
     /**
diff --git a/src/Plugins/Coverage.php b/src/Plugins/Coverage.php
index ed7b1214..50bbe8e3 100644
--- a/src/Plugins/Coverage.php
+++ b/src/Plugins/Coverage.php
@@ -17,6 +17,8 @@ use Symfony\Component\Console\Output\OutputInterface;
  */
 final class Coverage implements AddsOutput, HandlesArguments
 {
+    use Concerns\HandleArguments;
+
     private const string COVERAGE_OPTION = 'coverage';
 
     private const string MIN_OPTION = 'min';
@@ -77,11 +79,9 @@ final class Coverage implements AddsOutput, HandlesArguments
             return false;
         }))];
 
-        $originals = array_flip($originals);
         foreach ($arguments as $argument) {
-            unset($originals[$argument]);
+            $originals = $this->popArgument($argument, $originals);
         }
-        $originals = array_flip($originals);
 
         $inputs = [];
         $inputs[] = new InputOption(self::COVERAGE_OPTION, null, InputOption::VALUE_NONE);
diff --git a/tests/.snapshots/success.txt b/tests/.snapshots/success.txt
index e793ab48..e3e3a282 100644
--- a/tests/.snapshots/success.txt
+++ b/tests/.snapshots/success.txt
@@ -1716,6 +1716,8 @@
   ✓ method hasArgument with ('someValue', true)
   ✓ method hasArgument with ('--a', false)
   ✓ method hasArgument with ('--undefined-argument', false)
+  ✓ popArgument preserves duplicate values when removing a missing argument
+  ✓ popArgument preserves duplicate values when removing an existing argument
 
    PASS  Tests\Unit\Plugins\Environment
   ✓ environment is set to CI when --ci option is used
@@ -1913,6 +1915,7 @@
   ✓ parallel
   ✓ a parallel test can extend another test with same name
   ✓ parallel reports invalid datasets as failures
+  ✓ parallel can have multiple exclude-groups
 
    PASS  Tests\Visual\ParallelNestedDatasets
   ✓ parallel loads nested datasets from nested directories
@@ -1946,4 +1949,4 @@
   ✓ pass with dataset with ('my-datas-set-value')
   ✓ within describe → pass with dataset with ('my-datas-set-value')
 
-  Tests:    2 deprecated, 4 warnings, 5 incomplete, 2 notices, 40 todos, 35 skipped, 1335 passed (3024 assertions)
\ No newline at end of file
+  Tests:    2 deprecated, 4 warnings, 5 incomplete, 2 notices, 40 todos, 35 skipped, 1332 passed (3014 assertions)
diff --git a/tests/Unit/Plugins/Concerns/HandleArguments.php b/tests/Unit/Plugins/Concerns/HandleArguments.php
index 5cc91bb5..7f33c7c5 100644
--- a/tests/Unit/Plugins/Concerns/HandleArguments.php
+++ b/tests/Unit/Plugins/Concerns/HandleArguments.php
@@ -24,3 +24,27 @@ test('method hasArgument', function (string $argument, bool $expectedResult) {
     ['--a', false],
     ['--undefined-argument', false],
 ]);
+
+test('popArgument preserves duplicate values when removing a missing argument', function () {
+    $obj = new class
+    {
+        use HandleArguments;
+    };
+
+    $arguments = ['--verbose', '--exclude-group', 'firstGroup', '--exclude-group', 'secondGroup', '--filter=MyTest'];
+    $result = $obj->popArgument('--missingitem', $arguments);
+
+    expect($result)->toBe($arguments);
+});
+
+test('popArgument preserves duplicate values when removing an existing argument', function () {
+    $obj = new class
+    {
+        use HandleArguments;
+    };
+
+    $arguments = ['--verbose', '--exclude-group', 'firstGroup', '--exclude-group', 'secondGroup', '--filter=MyTest'];
+    $result = $obj->popArgument('--verbose', $arguments);
+
+    expect($result)->toBe(['--exclude-group', 'firstGroup', '--exclude-group', 'secondGroup', '--filter=MyTest']);
+});
diff --git a/tests/Visual/Parallel.php b/tests/Visual/Parallel.php
index 6fc05865..f0eaff97 100644
--- a/tests/Visual/Parallel.php
+++ b/tests/Visual/Parallel.php
@@ -24,7 +24,7 @@ test('parallel', function () use ($run) {
         $file = file_get_contents(__FILE__);
         $file = preg_replace(
             '/\$expected = \'.*?\';/',
-            "\$expected = '2 deprecated, 4 warnings, 5 incomplete, 3 notices, 40 todos, 27 skipped, 1319 passed (2973 assertions)';",
+            "\$expected = '2 deprecated, 4 warnings, 5 incomplete, 3 notices, 40 todos, 27 skipped, 1315 passed (2961 assertions)';",
             $file,
         );
         file_put_contents(__FILE__, $file);
@@ -47,3 +47,14 @@ test('parallel reports invalid datasets as failures', function () use ($run) {
         ->toContain('Tests:    1 failed, 1 passed (1 assertions)')
         ->toContain('Parallel: 3 processes');
 })->skipOnWindows();
+
+test('parallel can have multiple exclude-groups', function () use ($run) {
+    $singleExclude = $run('--exclude-group=integration');
+    $doubleExclude = $run('--exclude-group=integration', '--exclude-group=container');
+
+    preg_match('/(\d+) passed/', $singleExclude, $singleMatch);
+    preg_match('/(\d+) passed/', $doubleExclude, $doubleMatch);
+
+    expect((int) $doubleMatch[1])->toBeLessThan((int) $singleMatch[1]);
+    expect($doubleExclude)->toContain('Parallel: 3 processes');
+})->skipOnWindows();